10 selections by the Philadelphia Flyers in the 2006 NHL Entry Draft.
| Year | Pick | Round | Team | Player | Pos | Amateur Club | League | Country |
|---|---|---|---|---|---|---|---|---|
| 2006 | 22 | 1 | Philadelphia Flyers | Claude Giroux | RW | Gatineau | QMJHL | CAN |
| 2006 | 39 | 2 | Philadelphia Flyers | Andreas Nodl | RW | Sioux Falls | USHL | AUT |
| 2006 | 42 | 2 | Philadelphia Flyers | Michael Ratchuk | D | USA U-18 | USA | USA |
| 2006 | 55 | 2 | Philadelphia Flyers | Denis Bodrov | D | Togliatti | RUS | RUS |
| 2006 | 79 | 3 | Philadelphia Flyers | Jon Matsumoto | C | Bowling Green | CCHA | CAN |
| 2006 | 101 | 4 | Philadelphia Flyers | Joonas Lehtivuori | D | Ilves Jr. | Finland Jr. | FIN |
| 2006 | 109 | 4 | Philadelphia Flyers | Jakub Kovar | G | Budejovice Jr. | CZE JR. | CZE |
| 2006 | 145 | 5 | Philadelphia Flyers | Jonathan Rheault | RW | Providence | H-EAST | USA |
| 2006 | 175 | 6 | Philadelphia Flyers | Michael Dupont | G | Baie Comeau | QMJHL | CHE |
| 2006 | 205 | 7 | Philadelphia Flyers | Andrei Popov | RW | Chelyabinsk | RUS | RUS |